nf-core/rnaseq

rnaseq

✅ Recently maintained

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

1,404Stars
910Forks
+47-day stars

Nextflow · MIT · Last push 2026-10-30

Official repository & installation ↗
nf-corenextflowworkflowrna-seqrnapipeline

GitValue · Value evidence

Unscored · Evidence coverage 0%

Provisional rubric; documentation and runtime testing are separate. Missing evidence does not imply low value.

Star history

2025-09-292026-11-03
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Get the project

git clone https://github.com/nf-core/rnaseq.git

Cloning downloads the source. For dependencies and installation, follow the project README.

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