nf-core/sarek

sarek

✅ Recently maintained

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

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Nextflow · MIT · Last push 2026-11-02

Official repository & installation ↗

GitValue · Value evidence

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Provisional rubric; documentation and runtime testing are separate. Missing evidence does not imply low value.

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2025-09-292026-11-03
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Get the project

git clone https://github.com/nf-core/sarek.git

Cloning downloads the source. For dependencies and installation, follow the project README.

Related projects & alternative candidates

Related domains do not imply feature parity. Review official documentation and licenses.